Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm32025-201ENSMUST00000217960 307 ntBASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm10012-201ENSMUST00000078252 192 ntBASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim43aQ3TL54 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm9022-201ENSMUST00000182482 992 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm27839-201ENSMUST00000184242 106 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm29649-201ENSMUST00000185649 419 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm38092-201ENSMUST00000195600 653 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm37497-201ENSMUST00000195830 798 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gm24526-201ENSMUST00000082921 158 ntBASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim43aQ3TL54 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim43aQ3TL54 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms