Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Hoxc4Q08624 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxc4Q08624 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxc4Q08624 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxc4Q08624 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Hoxc4Q08624 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm14724-201ENSMUST00000118400 537 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm5419-201ENSMUST00000119301 527 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm12196-201ENSMUST00000120954 262 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm3332-201ENSMUST00000189337 928 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm4482-201ENSMUST00000200876 742 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.83□□□□□ -0.52
Hoxc4Q08624 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Hoxc4Q08624 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Hoxc4Q08624 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm15515-201ENSMUST00000117827 822 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm11941-201ENSMUST00000119904 610 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm25881-201ENSMUST00000157783 103 ntBASIC11.82□□□□□ -0.52
Hoxc4Q08624 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
Hoxc4Q08624 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hoxc4Q08624 Gm5706-201ENSMUST00000181525 993 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms