Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Lig3P97386 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Lig3P97386 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lig3P97386 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Lig3P97386 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Gm14208-201ENSMUST00000119645 678 ntBASIC13.53□□□□□ -0.24
Lig3P97386 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Lig3P97386 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lig3P97386 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Gm3508-201ENSMUST00000186012 792 ntBASIC13.53□□□□□ -0.24
Lig3P97386 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.53□□□□□ -0.24
Lig3P97386 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Lig3P97386 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Lig3P97386 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Lig3P97386 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.53□□□□□ -0.24
Lig3P97386 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.53□□□□□ -0.24
Lig3P97386 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Lig3P97386 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lig3P97386 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lig3P97386 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Lig3P97386 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lig3P97386 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lig3P97386 Map1b-203ENSMUST00000223725 2669 ntBASIC13.52□□□□□ -0.24
Lig3P97386 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lig3P97386 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.52□□□□□ -0.24
Lig3P97386 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lig3P97386 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.52□□□□□ -0.24
Lig3P97386 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lig3P97386 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.52□□□□□ -0.25
Lig3P97386 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Lig3P97386 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.52□□□□□ -0.25
Lig3P97386 Gm28450-201ENSMUST00000187349 638 ntBASIC13.52□□□□□ -0.25
Lig3P97386 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.52□□□□□ -0.25
Lig3P97386 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.52□□□□□ -0.25
Lig3P97386 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.52□□□□□ -0.25
Lig3P97386 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.52□□□□□ -0.25
Lig3P97386 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Lig3P97386 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.52□□□□□ -0.25
Lig3P97386 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lig3P97386 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.51□□□□□ -0.25
Lig3P97386 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Lig3P97386 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lig3P97386 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.51□□□□□ -0.25
Lig3P97386 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lig3P97386 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.51□□□□□ -0.25
Lig3P97386 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.51□□□□□ -0.25
Lig3P97386 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.51□□□□□ -0.25
Lig3P97386 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.51□□□□□ -0.25
Lig3P97386 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.51□□□□□ -0.25
Lig3P97386 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.51□□□□□ -0.25
Lig3P97386 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms