Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx3P70354 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Msx3P70354 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Msx3P70354 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx3P70354 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Msx3P70354 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Msx3P70354 Gm24934-201ENSMUST00000103764 111 ntBASIC12.66□□□□□ -0.38
Msx3P70354 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Gm13316-201ENSMUST00000140537 691 ntBASIC12.66□□□□□ -0.38
Msx3P70354 Gm13570-201ENSMUST00000140763 309 ntBASIC12.66□□□□□ -0.38
Msx3P70354 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.66□□□□□ -0.38
Msx3P70354 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.66□□□□□ -0.38
Msx3P70354 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx3P70354 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.66□□□□□ -0.38
Msx3P70354 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx3P70354 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Msx3P70354 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx3P70354 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Gm43433-201ENSMUST00000196573 481 ntBASIC12.66□□□□□ -0.38
Msx3P70354 Gm42693-201ENSMUST00000196779 631 ntBASIC12.66□□□□□ -0.38
Msx3P70354 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.66□□□□□ -0.38
Msx3P70354 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Msx3P70354 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.66□□□□□ -0.38
Msx3P70354 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Msx3P70354 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Msx3P70354 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Msx3P70354 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.66□□□□□ -0.38
Msx3P70354 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx3P70354 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx3P70354 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.66□□□□□ -0.38
Msx3P70354 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.65□□□□□ -0.38
Msx3P70354 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Msx3P70354 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.65□□□□□ -0.38
Msx3P70354 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.65□□□□□ -0.38
Msx3P70354 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Msx3P70354 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Msx3P70354 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Msx3P70354 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Msx3P70354 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Msx3P70354 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Msx3P70354 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.64□□□□□ -0.39
Msx3P70354 Pck2-205ENSMUST00000226352 2784 ntBASIC12.64□□□□□ -0.39
Msx3P70354 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Msx3P70354 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Msx3P70354 Gm22018-201ENSMUST00000104357 131 ntBASIC12.64□□□□□ -0.39
Msx3P70354 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.64□□□□□ -0.39
Msx3P70354 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Msx3P70354 Gm13875-201ENSMUST00000120162 282 ntBASIC12.64□□□□□ -0.39
Msx3P70354 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.64□□□□□ -0.39
Msx3P70354 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.64□□□□□ -0.39
Msx3P70354 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.64□□□□□ -0.39
Msx3P70354 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.64□□□□□ -0.39
Msx3P70354 Gm43133-201ENSMUST00000197472 463 ntBASIC12.64□□□□□ -0.39
Msx3P70354 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.64□□□□□ -0.39
Msx3P70354 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms