Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh6P54276 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Gm13809-201ENSMUST00000117921 597 ntBASIC15.54■□□□□ 0.08
Msh6P54276 Gm16397-201ENSMUST00000122201 494 ntBASIC15.54■□□□□ 0.08
Msh6P54276 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.54■□□□□ 0.08
Msh6P54276 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.54■□□□□ 0.08
Msh6P54276 Gm18711-201ENSMUST00000199341 750 ntBASIC15.54■□□□□ 0.08
Msh6P54276 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Gm45909-201ENSMUST00000212413 1031 ntBASIC15.54■□□□□ 0.08
Msh6P54276 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh6P54276 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh6P54276 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Msh6P54276 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Msh6P54276 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Msh6P54276 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC15.54■□□□□ 0.08
Msh6P54276 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh6P54276 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh6P54276 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Msh6P54276 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Msh6P54276 Gm15573-201ENSMUST00000119487 540 ntBASIC15.53■□□□□ 0.08
Msh6P54276 Gm11675-201ENSMUST00000121873 832 ntBASIC15.53■□□□□ 0.08
Msh6P54276 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Msh6P54276 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh6P54276 Gm22138-201ENSMUST00000158748 128 ntBASIC15.53■□□□□ 0.08
Msh6P54276 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.53■□□□□ 0.08
Msh6P54276 Gm4157-201ENSMUST00000211647 679 ntBASIC15.53■□□□□ 0.08
Msh6P54276 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.53■□□□□ 0.08
Msh6P54276 AC129219.2-201ENSMUST00000224324 701 ntBASIC15.53■□□□□ 0.08
Msh6P54276 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Msh6P54276 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.53■□□□□ 0.08
Msh6P54276 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Msh6P54276 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.53■□□□□ 0.08
Msh6P54276 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh6P54276 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.52■□□□□ 0.08
Msh6P54276 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Msh6P54276 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Msh6P54276 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Msh6P54276 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.52■□□□□ 0.08
Msh6P54276 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Msh6P54276 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Msh6P54276 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Msh6P54276 AC171277.1-201ENSMUST00000216902 1441 ntBASIC15.52■□□□□ 0.08
Msh6P54276 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Msh6P54276 Gm12857-201ENSMUST00000117678 592 ntBASIC15.52■□□□□ 0.08
Msh6P54276 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC15.52■□□□□ 0.08
Msh6P54276 Mir1901-201ENSMUST00000122616 78 ntBASIC15.52■□□□□ 0.08
Msh6P54276 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Msh6P54276 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Msh6P54276 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
Msh6P54276 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Msh6P54276 Gm9132-201ENSMUST00000210182 832 ntBASIC15.52■□□□□ 0.08
Msh6P54276 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.52■□□□□ 0.08
Msh6P54276 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.52■□□□□ 0.08
Msh6P54276 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Msh6P54276 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Msh6P54276 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Msh6P54276 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Msh6P54276 Snora73b-201ENSMUST00000083419 205 ntBASIC15.52■□□□□ 0.08
Msh6P54276 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms