Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.7□□□□□ -0.54
Cdx2P43241 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Gm14760-201ENSMUST00000121831 999 ntBASIC11.7□□□□□ -0.54
Cdx2P43241 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Cdx2P43241 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.7□□□□□ -0.54
Cdx2P43241 Gm22144-201ENSMUST00000157402 102 ntBASIC11.7□□□□□ -0.54
Cdx2P43241 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.7□□□□□ -0.54
Cdx2P43241 Mir6958-201ENSMUST00000184207 73 ntBASIC11.7□□□□□ -0.54
Cdx2P43241 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cdx2P43241 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdx2P43241 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cdx2P43241 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.7□□□□□ -0.54
Cdx2P43241 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cdx2P43241 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdx2P43241 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdx2P43241 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdx2P43241 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.69□□□□□ -0.54
Cdx2P43241 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.69□□□□□ -0.54
Cdx2P43241 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm11956-201ENSMUST00000119525 512 ntBASIC11.69□□□□□ -0.54
Cdx2P43241 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdx2P43241 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdx2P43241 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.69□□□□□ -0.54
Cdx2P43241 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.69□□□□□ -0.54
Cdx2P43241 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdx2P43241 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm9358-201ENSMUST00000183067 927 ntBASIC11.69□□□□□ -0.54
Cdx2P43241 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm17831-201ENSMUST00000205579 900 ntBASIC11.69□□□□□ -0.54
Cdx2P43241 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.69□□□□□ -0.54
Cdx2P43241 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cdx2P43241 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.69□□□□□ -0.54
Cdx2P43241 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.69□□□□□ -0.54
Cdx2P43241 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cdx2P43241 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.69□□□□□ -0.54
Cdx2P43241 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cdx2P43241 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.68□□□□□ -0.54
Cdx2P43241 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.68□□□□□ -0.54
Cdx2P43241 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm11663-201ENSMUST00000117888 290 ntBASIC11.68□□□□□ -0.54
Cdx2P43241 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.68□□□□□ -0.54
Cdx2P43241 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.68□□□□□ -0.54
Cdx2P43241 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cdx2P43241 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms