Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.65□□□□□ -0.38
Cxcl12P40224 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cxcl12P40224 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cxcl12P40224 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cxcl12P40224 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cxcl12P40224 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm25076-201ENSMUST00000104098 132 ntBASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm12579-201ENSMUST00000118040 783 ntBASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm13549-201ENSMUST00000118339 796 ntBASIC12.64□□□□□ -0.39
Cxcl12P40224 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.64□□□□□ -0.39
Cxcl12P40224 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm15744-201ENSMUST00000161734 213 ntBASIC12.64□□□□□ -0.39
Cxcl12P40224 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.64□□□□□ -0.39
Cxcl12P40224 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm43852-201ENSMUST00000202098 917 ntBASIC12.64□□□□□ -0.39
Cxcl12P40224 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm23680-201ENSMUST00000083162 164 ntBASIC12.64□□□□□ -0.39
Cxcl12P40224 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl12P40224 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.64□□□□□ -0.39
Cxcl12P40224 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl12P40224 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.63□□□□□ -0.39
Cxcl12P40224 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Gm14942-201ENSMUST00000119642 336 ntBASIC12.63□□□□□ -0.39
Cxcl12P40224 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Mt1-202ENSMUST00000211807 1085 ntBASIC12.63□□□□□ -0.39
Cxcl12P40224 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl12P40224 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl12P40224 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms