Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pde6aP27664 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pde6aP27664 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.28□□□□□ -0.12
Pde6aP27664 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pde6aP27664 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pde6aP27664 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6aP27664 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.27□□□□□ -0.12
Pde6aP27664 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6aP27664 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6aP27664 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6aP27664 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6aP27664 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pde6aP27664 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6aP27664 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pde6aP27664 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6aP27664 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pde6aP27664 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.27□□□□□ -0.13
Pde6aP27664 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.27□□□□□ -0.13
Pde6aP27664 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.27□□□□□ -0.13
Pde6aP27664 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.27□□□□□ -0.13
Pde6aP27664 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.27□□□□□ -0.13
Pde6aP27664 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.27□□□□□ -0.13
Pde6aP27664 Gm44967-201ENSMUST00000207047 631 ntBASIC14.27□□□□□ -0.13
Pde6aP27664 Gm45224-201ENSMUST00000208203 414 ntBASIC14.27□□□□□ -0.13
Pde6aP27664 Gm13097-201ENSMUST00000210722 397 ntBASIC14.27□□□□□ -0.13
Pde6aP27664 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.27□□□□□ -0.13
Pde6aP27664 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.27□□□□□ -0.13
Pde6aP27664 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Pde6aP27664 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pde6aP27664 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pde6aP27664 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pde6aP27664 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC14.26□□□□□ -0.13
Pde6aP27664 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pde6aP27664 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pde6aP27664 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.26□□□□□ -0.13
Pde6aP27664 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.26□□□□□ -0.13
Pde6aP27664 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.26□□□□□ -0.13
Pde6aP27664 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.26□□□□□ -0.13
Pde6aP27664 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.26□□□□□ -0.13
Pde6aP27664 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pde6aP27664 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pde6aP27664 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.26□□□□□ -0.13
Pde6aP27664 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.26□□□□□ -0.13
Pde6aP27664 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pde6aP27664 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pde6aP27664 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pde6aP27664 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Pde6aP27664 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.25□□□□□ -0.13
Pde6aP27664 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.25□□□□□ -0.13
Pde6aP27664 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.25□□□□□ -0.13
Pde6aP27664 Gm15276-201ENSMUST00000145953 498 ntBASIC14.25□□□□□ -0.13
Pde6aP27664 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Gm25668-201ENSMUST00000157700 129 ntBASIC14.25□□□□□ -0.13
Pde6aP27664 Gm26083-201ENSMUST00000157904 193 ntBASIC14.25□□□□□ -0.13
Pde6aP27664 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pde6aP27664 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms