Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.29□□□□□ -0.76
Col8a2P25318 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Col8a2P25318 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Col8a2P25318 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Col8a2P25318 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Col8a2P25318 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Col8a2P25318 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Col8a2P25318 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Col8a2P25318 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.28□□□□□ -0.76
Col8a2P25318 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Col8a2P25318 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Gm23200-201ENSMUST00000104379 132 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Gm11439-201ENSMUST00000118598 409 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Gm24749-201ENSMUST00000157838 343 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Col8a2P25318 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Gm37666-201ENSMUST00000194110 866 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Gm44651-201ENSMUST00000207343 372 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Gm19994-201ENSMUST00000217086 586 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Col8a2P25318 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.28□□□□□ -0.76
Col8a2P25318 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Col8a2P25318 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.28□□□□□ -0.76
Col8a2P25318 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Col8a2P25318 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Col8a2P25318 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Col8a2P25318 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Col8a2P25318 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Col8a2P25318 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Col8a2P25318 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Col8a2P25318 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Col8a2P25318 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.27□□□□□ -0.77
Col8a2P25318 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Col8a2P25318 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Col8a2P25318 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Col8a2P25318 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Col8a2P25318 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Col8a2P25318 Gm14644-201ENSMUST00000116671 647 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Gm12015-201ENSMUST00000117065 843 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Gm14028-201ENSMUST00000117434 479 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Gm12217-201ENSMUST00000118858 696 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Gm7722-201ENSMUST00000120646 741 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Gm14277-201ENSMUST00000121195 360 ntBASIC10.27□□□□□ -0.77
Col8a2P25318 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Col8a2P25318 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.27□□□□□ -0.77
Col8a2P25318 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Col8a2P25318 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms