Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gm38144-201ENSMUST00000192790 465 ntBASIC10.31□□□□□ -0.76
Tnfrsf9P20334 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf9P20334 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Gm14301-201ENSMUST00000120181 324 ntBASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Gm21769-201ENSMUST00000211922 111 ntBASIC10.3□□□□□ -0.76
Tnfrsf9P20334 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.3□□□□□ -0.76
Tnfrsf9P20334 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Tnfrsf9P20334 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms