Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.53□□□□□ -0.56
Sod1P08228 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sod1P08228 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sod1P08228 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Sod1P08228 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sod1P08228 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Gm15566-201ENSMUST00000121130 590 ntBASIC11.52□□□□□ -0.57
Sod1P08228 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Mir8115-201ENSMUST00000184992 119 ntBASIC11.52□□□□□ -0.57
Sod1P08228 Gm5714-201ENSMUST00000197343 566 ntBASIC11.52□□□□□ -0.57
Sod1P08228 Gm7600-201ENSMUST00000209657 785 ntBASIC11.52□□□□□ -0.57
Sod1P08228 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sod1P08228 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.52□□□□□ -0.57
Sod1P08228 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Sod1P08228 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.52□□□□□ -0.57
Sod1P08228 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sod1P08228 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.52□□□□□ -0.57
Sod1P08228 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.52□□□□□ -0.57
Sod1P08228 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.52□□□□□ -0.57
Sod1P08228 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.52□□□□□ -0.57
Sod1P08228 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sod1P08228 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.52□□□□□ -0.57
Sod1P08228 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Sod1P08228 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Gm8731-201ENSMUST00000118088 412 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Gm15352-201ENSMUST00000118696 270 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Gm11246-201ENSMUST00000120880 345 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.51□□□□□ -0.57
Sod1P08228 Gm8194-201ENSMUST00000159783 859 ntBASIC11.51□□□□□ -0.57
Sod1P08228 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Gm5706-201ENSMUST00000181525 993 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Sod1P08228 Gm6867-201ENSMUST00000219165 425 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sod1P08228 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sod1P08228 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sod1P08228 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.51□□□□□ -0.57
Sod1P08228 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sod1P08228 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sod1P08228 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Sod1P08228 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sod1P08228 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms