Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Mir1247-201ENSMUST00000116706 82 ntBASIC12.67□□□□□ -0.38
Atf6F6VAN0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Gm27023-201ENSMUST00000182372 285 ntBASIC12.67□□□□□ -0.38
Atf6F6VAN0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Gm37424-201ENSMUST00000191727 561 ntBASIC12.67□□□□□ -0.38
Atf6F6VAN0 Gm38158-201ENSMUST00000194617 339 ntBASIC12.67□□□□□ -0.38
Atf6F6VAN0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.67□□□□□ -0.38
Atf6F6VAN0 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.67□□□□□ -0.38
Atf6F6VAN0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6F6VAN0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.66□□□□□ -0.38
Atf6F6VAN0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm12957-201ENSMUST00000117835 377 ntBASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm14999-201ENSMUST00000121039 624 ntBASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm44882-201ENSMUST00000205702 802 ntBASIC12.66□□□□□ -0.38
Atf6F6VAN0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm9823-201ENSMUST00000051212 327 ntBASIC12.66□□□□□ -0.38
Atf6F6VAN0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.66□□□□□ -0.38
Atf6F6VAN0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Atf6F6VAN0 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6F6VAN0 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 Gm27572-201ENSMUST00000183702 255 ntBASIC12.65□□□□□ -0.38
Atf6F6VAN0 Mir7085-201ENSMUST00000184353 66 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms