Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp8Q9DB85 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp8Q9DB85 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.11□□□□□ -0.47
Rrp8Q9DB85 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.11□□□□□ -0.47
Rrp8Q9DB85 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rrp8Q9DB85 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Gm23596-201ENSMUST00000104304 132 ntBASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Gm807-202ENSMUST00000224929 408 ntBASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Gm26448-201ENSMUST00000082446 203 ntBASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rrp8Q9DB85 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Gm24891-201ENSMUST00000104391 136 ntBASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Gm12208-201ENSMUST00000122004 163 ntBASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Rubie-203ENSMUST00000227803 2430 ntBASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rrp8Q9DB85 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rrp8Q9DB85 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rrp8Q9DB85 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Rrp8Q9DB85 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp8Q9DB85 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp8Q9DB85 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp8Q9DB85 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp8Q9DB85 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rrp8Q9DB85 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Rrp8Q9DB85 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms