Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC16.22■□□□□ 0.19
U2af1Q9D883 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
U2af1Q9D883 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
U2af1Q9D883 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
U2af1Q9D883 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
U2af1Q9D883 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC16.21■□□□□ 0.19
U2af1Q9D883 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
U2af1Q9D883 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
U2af1Q9D883 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Gm13996-201ENSMUST00000118456 430 ntBASIC16.21■□□□□ 0.19
U2af1Q9D883 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
U2af1Q9D883 Gm14017-201ENSMUST00000121934 386 ntBASIC16.21■□□□□ 0.19
U2af1Q9D883 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Gm8913-201ENSMUST00000209491 641 ntBASIC16.21■□□□□ 0.19
U2af1Q9D883 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.21■□□□□ 0.19
U2af1Q9D883 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.21■□□□□ 0.19
U2af1Q9D883 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
U2af1Q9D883 Gm5780-201ENSMUST00000217774 1834 ntBASIC16.21■□□□□ 0.19
U2af1Q9D883 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
U2af1Q9D883 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
U2af1Q9D883 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
U2af1Q9D883 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
U2af1Q9D883 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
U2af1Q9D883 Gm37391-201ENSMUST00000194891 2318 ntBASIC16.2■□□□□ 0.18
U2af1Q9D883 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.2■□□□□ 0.18
U2af1Q9D883 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm2260-201ENSMUST00000184965 657 ntBASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm44882-201ENSMUST00000205702 802 ntBASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.2■□□□□ 0.18
U2af1Q9D883 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16.2■□□□□ 0.18
U2af1Q9D883 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
U2af1Q9D883 Gm9947-201ENSMUST00000067599 2920 ntBASIC16.2■□□□□ 0.18
U2af1Q9D883 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
U2af1Q9D883 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.19■□□□□ 0.18
U2af1Q9D883 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Gm11989-201ENSMUST00000117240 672 ntBASIC16.19■□□□□ 0.18
U2af1Q9D883 Gm11362-201ENSMUST00000118838 850 ntBASIC16.19■□□□□ 0.18
U2af1Q9D883 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC16.19■□□□□ 0.18
U2af1Q9D883 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
U2af1Q9D883 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC16.19■□□□□ 0.18
U2af1Q9D883 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms