Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gm14130-201ENSMUST00000118417 987 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gm26361-201ENSMUST00000158868 186 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gm45224-201ENSMUST00000208203 414 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Lysmd3Q99LE3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Lysmd3Q99LE3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lysmd3Q99LE3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Lysmd3Q99LE3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Lysmd3Q99LE3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm24934-201ENSMUST00000103764 111 ntBASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm12997-201ENSMUST00000120207 640 ntBASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Rprl1-202ENSMUST00000198476 238 ntBASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm44262-201ENSMUST00000204969 372 ntBASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm45186-201ENSMUST00000206874 478 ntBASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Lysmd3Q99LE3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lysmd3Q99LE3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms