Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.26□□□□□ -0.61
Lims1Q99JW4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm27682-201ENSMUST00000183930 110 ntBASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm27839-201ENSMUST00000184242 106 ntBASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm43630-201ENSMUST00000201550 776 ntBASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm45930-201ENSMUST00000221330 292 ntBASIC11.26□□□□□ -0.61
Lims1Q99JW4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.26□□□□□ -0.61
Lims1Q99JW4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lims1Q99JW4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Gm12742-201ENSMUST00000117326 410 ntBASIC11.25□□□□□ -0.61
Lims1Q99JW4 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Gm6007-201ENSMUST00000208170 823 ntBASIC11.25□□□□□ -0.61
Lims1Q99JW4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.25□□□□□ -0.61
Lims1Q99JW4 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lims1Q99JW4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.24□□□□□ -0.61
Lims1Q99JW4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lims1Q99JW4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms