Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clip1Q922J3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Clip1Q922J3 AC121960.1-201ENSMUST00000227982 564 ntBASIC19.21■□□□□ 0.67
Clip1Q922J3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC19.21■□□□□ 0.67
Clip1Q922J3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Clip1Q922J3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip1Q922J3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Clip1Q922J3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Clip1Q922J3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clip1Q922J3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC19.21■□□□□ 0.67
Clip1Q922J3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Clip1Q922J3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Gm15782-201ENSMUST00000121073 445 ntBASIC19.2■□□□□ 0.66
Clip1Q922J3 Gm14460-201ENSMUST00000121511 639 ntBASIC19.2■□□□□ 0.66
Clip1Q922J3 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Gm28686-201ENSMUST00000187404 609 ntBASIC19.2■□□□□ 0.66
Clip1Q922J3 Gm38228-201ENSMUST00000193169 1293 ntBASIC19.2■□□□□ 0.66
Clip1Q922J3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC19.2■□□□□ 0.66
Clip1Q922J3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Gm44260-201ENSMUST00000204946 2094 ntBASIC19.2■□□□□ 0.66
Clip1Q922J3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Clip1Q922J3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip1Q922J3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm15573-201ENSMUST00000119487 540 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC19.19■□□□□ 0.66
Clip1Q922J3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC19.19■□□□□ 0.66
Clip1Q922J3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm18893-201ENSMUST00000198416 943 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clip1Q922J3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm2420-201ENSMUST00000119864 2149 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC19.19■□□□□ 0.66
Clip1Q922J3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm15004-201ENSMUST00000119192 630 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm13263-201ENSMUST00000121271 838 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm14665-201ENSMUST00000122294 557 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC19.19■□□□□ 0.66
Clip1Q922J3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clip1Q922J3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm22144-201ENSMUST00000157402 102 ntBASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clip1Q922J3 Gm8365-201ENSMUST00000197334 648 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms