Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc28bQ8CEG5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc28bQ8CEG5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Gm11618-201ENSMUST00000117946 267 ntBASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Gm28631-201ENSMUST00000190740 334 ntBASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.2□□□□□ -0.46
Ccdc28bQ8CEG5 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gm22121-201ENSMUST00000175148 54 ntBASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Mir6956-201ENSMUST00000183598 62 ntBASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.19□□□□□ -0.46
Ccdc28bQ8CEG5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms