Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm23153-201ENSMUST00000175323 313 ntBASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gm2517-201ENSMUST00000215651 348 ntBASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Snrnp40Q6PE01 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gm37905-201ENSMUST00000195310 341 ntBASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Snrnp40Q6PE01 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Snrnp40Q6PE01 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms