Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Krt39Q6IFX4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Krt39Q6IFX4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Gm25857-201ENSMUST00000082788 129 ntBASIC13.64□□□□□ -0.23
Krt39Q6IFX4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Krt39Q6IFX4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Gm13315-201ENSMUST00000120376 991 ntBASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Krt39Q6IFX4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Gm11425-201ENSMUST00000119608 498 ntBASIC13.62□□□□□ -0.23
Krt39Q6IFX4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms