Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm21769-201ENSMUST00000211922 111 ntBASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upf3bQ3ULL6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm14723-201ENSMUST00000118686 215 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm44364-201ENSMUST00000198368 141 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm43822-201ENSMUST00000200285 476 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm44124-201ENSMUST00000204159 472 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Olfr582-201ENSMUST00000098212 960 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upf3bQ3ULL6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Matn2-203ENSMUST00000226766 3252 ntBASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Gm14726-201ENSMUST00000120623 896 ntBASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upf3bQ3ULL6 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms