Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.97□□□□□ -0.49
Msx2Q03358 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Msx2Q03358 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Msx2Q03358 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.97□□□□□ -0.49
Msx2Q03358 Gm23363-201ENSMUST00000175024 79 ntBASIC11.97□□□□□ -0.49
Msx2Q03358 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.97□□□□□ -0.49
Msx2Q03358 Gm44855-201ENSMUST00000205725 362 ntBASIC11.97□□□□□ -0.49
Msx2Q03358 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.97□□□□□ -0.49
Msx2Q03358 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Msx2Q03358 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Msx2Q03358 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Msx2Q03358 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Msx2Q03358 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Msx2Q03358 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Msx2Q03358 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.96□□□□□ -0.49
Msx2Q03358 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.96□□□□□ -0.49
Msx2Q03358 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Msx2Q03358 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Msx2Q03358 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Msx2Q03358 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Gm24231-201ENSMUST00000104315 133 ntBASIC11.96□□□□□ -0.49
Msx2Q03358 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Gm14921-201ENSMUST00000118643 908 ntBASIC11.96□□□□□ -0.49
Msx2Q03358 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.96□□□□□ -0.49
Msx2Q03358 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.96□□□□□ -0.49
Msx2Q03358 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.96□□□□□ -0.49
Msx2Q03358 Gm35960-201ENSMUST00000202712 767 ntBASIC11.96□□□□□ -0.49
Msx2Q03358 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.96□□□□□ -0.49
Msx2Q03358 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Msx2Q03358 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx2Q03358 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx2Q03358 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx2Q03358 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.96□□□□□ -0.5
Msx2Q03358 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.96□□□□□ -0.5
Msx2Q03358 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx2Q03358 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx2Q03358 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.96□□□□□ -0.5
Msx2Q03358 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Msx2Q03358 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx2Q03358 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Msx2Q03358 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Msx2Q03358 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.95□□□□□ -0.5
Msx2Q03358 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.95□□□□□ -0.5
Msx2Q03358 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Gm11618-201ENSMUST00000117946 267 ntBASIC11.95□□□□□ -0.5
Msx2Q03358 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.95□□□□□ -0.5
Msx2Q03358 Gm17208-201ENSMUST00000168388 535 ntBASIC11.95□□□□□ -0.5
Msx2Q03358 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.95□□□□□ -0.5
Msx2Q03358 Mir6392-201ENSMUST00000184924 108 ntBASIC11.95□□□□□ -0.5
Msx2Q03358 Gm28631-201ENSMUST00000190740 334 ntBASIC11.95□□□□□ -0.5
Msx2Q03358 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.95□□□□□ -0.5
Msx2Q03358 Gm18473-201ENSMUST00000220543 868 ntBASIC11.95□□□□□ -0.5
Msx2Q03358 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.95□□□□□ -0.5
Msx2Q03358 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Msx2Q03358 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Msx2Q03358 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Msx2Q03358 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.95□□□□□ -0.5
Msx2Q03358 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms