Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.56■□□□□ 0.24
Nphp4P59240 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Nphp4P59240 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Gm15131-201ENSMUST00000119124 595 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Gm15573-201ENSMUST00000119487 540 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC16.56■□□□□ 0.24
Nphp4P59240 Gm10731-201ENSMUST00000181171 448 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Gm3508-201ENSMUST00000186012 792 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC16.56■□□□□ 0.24
Nphp4P59240 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC16.56■□□□□ 0.24
Nphp4P59240 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Nphp4P59240 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Nphp4P59240 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC16.56■□□□□ 0.24
Nphp4P59240 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Nphp4P59240 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Gm9796-201ENSMUST00000062249 2250 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Gm44152-201ENSMUST00000205007 1691 ntBASIC16.56■□□□□ 0.24
Nphp4P59240 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
Nphp4P59240 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nphp4P59240 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC16.56■□□□□ 0.24
Nphp4P59240 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nphp4P59240 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Nphp4P59240 Gm12036-201ENSMUST00000120008 530 ntBASIC16.55■□□□□ 0.24
Nphp4P59240 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC16.55■□□□□ 0.24
Nphp4P59240 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC16.55■□□□□ 0.24
Nphp4P59240 Gm17831-201ENSMUST00000205579 900 ntBASIC16.55■□□□□ 0.24
Nphp4P59240 Gm44545-201ENSMUST00000208262 746 ntBASIC16.55■□□□□ 0.24
Nphp4P59240 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC16.55■□□□□ 0.24
Nphp4P59240 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nphp4P59240 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Nphp4P59240 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nphp4P59240 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC16.54■□□□□ 0.24
Nphp4P59240 Gm45113-201ENSMUST00000207518 165 ntBASIC16.54■□□□□ 0.24
Nphp4P59240 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Nphp4P59240 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Nphp4P59240 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC16.54■□□□□ 0.24
Nphp4P59240 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
Nphp4P59240 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Nphp4P59240 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC16.54■□□□□ 0.24
Nphp4P59240 Gm13916-201ENSMUST00000117368 628 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm15352-201ENSMUST00000118696 270 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm15566-201ENSMUST00000121130 590 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm12208-201ENSMUST00000122004 163 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Gm7666-201ENSMUST00000146631 819 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC16.53■□□□□ 0.24
Nphp4P59240 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nphp4P59240 Gm9136-201ENSMUST00000193368 454 ntBASIC16.53■□□□□ 0.24
Nphp4P59240 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms