Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.06□□□□□ -0.64
Abcd3P55096 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.06□□□□□ -0.64
Abcd3P55096 Gm37201-201ENSMUST00000191845 523 ntBASIC11.06□□□□□ -0.64
Abcd3P55096 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.06□□□□□ -0.64
Abcd3P55096 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Abcd3P55096 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Abcd3P55096 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Abcd3P55096 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Abcd3P55096 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Abcd3P55096 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Abcd3P55096 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.06□□□□□ -0.64
Abcd3P55096 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.06□□□□□ -0.64
Abcd3P55096 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Abcd3P55096 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.06□□□□□ -0.64
Abcd3P55096 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Abcd3P55096 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Abcd3P55096 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.06□□□□□ -0.64
Abcd3P55096 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Abcd3P55096 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Abcd3P55096 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.06□□□□□ -0.64
Abcd3P55096 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.05□□□□□ -0.64
Abcd3P55096 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Abcd3P55096 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.05□□□□□ -0.64
Abcd3P55096 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Abcd3P55096 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.05□□□□□ -0.64
Abcd3P55096 Gm12058-201ENSMUST00000118614 437 ntBASIC11.05□□□□□ -0.64
Abcd3P55096 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.05□□□□□ -0.64
Abcd3P55096 Gm13875-201ENSMUST00000120162 282 ntBASIC11.05□□□□□ -0.64
Abcd3P55096 Gm14999-201ENSMUST00000121039 624 ntBASIC11.05□□□□□ -0.64
Abcd3P55096 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.05□□□□□ -0.64
Abcd3P55096 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Abcd3P55096 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.05□□□□□ -0.64
Abcd3P55096 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Abcd3P55096 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Abcd3P55096 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Abcd3P55096 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Abcd3P55096 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Abcd3P55096 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.05□□□□□ -0.64
Abcd3P55096 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Abcd3P55096 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Abcd3P55096 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.04□□□□□ -0.64
Abcd3P55096 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.04□□□□□ -0.64
Abcd3P55096 Paupar-201ENSMUST00000194826 3482 ntBASIC11.04□□□□□ -0.64
Abcd3P55096 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.04□□□□□ -0.64
Abcd3P55096 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.04□□□□□ -0.64
Abcd3P55096 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Abcd3P55096 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Abcd3P55096 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Abcd3P55096 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Abcd3P55096 Gm43133-201ENSMUST00000197472 463 ntBASIC11.04□□□□□ -0.64
Abcd3P55096 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.04□□□□□ -0.64
Abcd3P55096 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms