Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.53□□□□□ -0.24
Rpl13P47963 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.53□□□□□ -0.24
Rpl13P47963 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rpl13P47963 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.53□□□□□ -0.24
Rpl13P47963 Gm8227-201ENSMUST00000223306 571 ntBASIC13.53□□□□□ -0.24
Rpl13P47963 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.53□□□□□ -0.24
Rpl13P47963 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.53□□□□□ -0.24
Rpl13P47963 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.53□□□□□ -0.24
Rpl13P47963 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Rpl13P47963 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Rpl13P47963 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.53□□□□□ -0.24
Rpl13P47963 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rpl13P47963 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpl13P47963 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rpl13P47963 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpl13P47963 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Rpl13P47963 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpl13P47963 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Rpl13P47963 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.52□□□□□ -0.25
Rpl13P47963 Gm14999-201ENSMUST00000121039 624 ntBASIC13.52□□□□□ -0.25
Rpl13P47963 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.52□□□□□ -0.25
Rpl13P47963 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.52□□□□□ -0.25
Rpl13P47963 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rpl13P47963 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.52□□□□□ -0.25
Rpl13P47963 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.52□□□□□ -0.25
Rpl13P47963 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Gm45880-201ENSMUST00000213041 853 ntBASIC13.52□□□□□ -0.25
Rpl13P47963 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.52□□□□□ -0.25
Rpl13P47963 Gm39404-201ENSMUST00000216350 313 ntBASIC13.52□□□□□ -0.25
Rpl13P47963 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.52□□□□□ -0.25
Rpl13P47963 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Rpl13P47963 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rpl13P47963 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Rpl13P47963 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpl13P47963 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Rpl13P47963 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.51□□□□□ -0.25
Rpl13P47963 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.51□□□□□ -0.25
Rpl13P47963 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpl13P47963 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpl13P47963 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpl13P47963 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.51□□□□□ -0.25
Rpl13P47963 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.51□□□□□ -0.25
Rpl13P47963 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.51□□□□□ -0.25
Rpl13P47963 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.51□□□□□ -0.25
Rpl13P47963 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.51□□□□□ -0.25
Rpl13P47963 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.51□□□□□ -0.25
Rpl13P47963 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.51□□□□□ -0.25
Rpl13P47963 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Gm13570-201ENSMUST00000140763 309 ntBASIC13.51□□□□□ -0.25
Rpl13P47963 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Rpl13P47963 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.51□□□□□ -0.25
Rpl13P47963 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.51□□□□□ -0.25
Rpl13P47963 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.51□□□□□ -0.25
Rpl13P47963 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
Rpl13P47963 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.51□□□□□ -0.25
Rpl13P47963 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Rpl13P47963 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.51□□□□□ -0.25
Rpl13P47963 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.51□□□□□ -0.25
Rpl13P47963 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.51□□□□□ -0.25
Rpl13P47963 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms