Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.19□□□□□ -0.3
Mmp3P28862 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Gm14263-201ENSMUST00000117955 746 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Mmp3P28862 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Mmp3P28862 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Mmp3P28862 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Gm23596-201ENSMUST00000104304 132 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Gm14058-201ENSMUST00000116082 735 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Gm13035-201ENSMUST00000117496 342 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.18□□□□□ -0.3
Mmp3P28862 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.18□□□□□ -0.3
Mmp3P28862 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Mmp3P28862 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.18□□□□□ -0.3
Mmp3P28862 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.18□□□□□ -0.3
Mmp3P28862 Gm44882-201ENSMUST00000205702 802 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Gm4607-201ENSMUST00000206649 577 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Gm21811-201ENSMUST00000096485 930 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.18□□□□□ -0.3
Mmp3P28862 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.18□□□□□ -0.3
Mmp3P28862 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Mmp3P28862 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp3P28862 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp3P28862 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mmp3P28862 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.17□□□□□ -0.3
Mmp3P28862 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp3P28862 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp3P28862 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp3P28862 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp3P28862 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms