Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.34□□□□□ -0.43
Nckap1P28660 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Nckap1P28660 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Nckap1P28660 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Nckap1P28660 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nckap1P28660 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nckap1P28660 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Nckap1P28660 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.33□□□□□ -0.44
Nckap1P28660 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.33□□□□□ -0.44
Nckap1P28660 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nckap1P28660 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nckap1P28660 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.33□□□□□ -0.44
Nckap1P28660 Gm24231-201ENSMUST00000104315 133 ntBASIC12.33□□□□□ -0.44
Nckap1P28660 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.33□□□□□ -0.44
Nckap1P28660 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.33□□□□□ -0.44
Nckap1P28660 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.33□□□□□ -0.44
Nckap1P28660 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.33□□□□□ -0.44
Nckap1P28660 Gm42937-201ENSMUST00000197360 752 ntBASIC12.33□□□□□ -0.44
Nckap1P28660 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.33□□□□□ -0.44
Nckap1P28660 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.33□□□□□ -0.44
Nckap1P28660 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.33□□□□□ -0.44
Nckap1P28660 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nckap1P28660 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
Nckap1P28660 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Nckap1P28660 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nckap1P28660 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Nckap1P28660 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nckap1P28660 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.32□□□□□ -0.44
Nckap1P28660 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.32□□□□□ -0.44
Nckap1P28660 Gm17040-202ENSMUST00000170597 889 ntBASIC12.32□□□□□ -0.44
Nckap1P28660 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.32□□□□□ -0.44
Nckap1P28660 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.32□□□□□ -0.44
Nckap1P28660 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.32□□□□□ -0.44
Nckap1P28660 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nckap1P28660 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nckap1P28660 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.32□□□□□ -0.44
Nckap1P28660 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms