Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cd40lgP27548 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Cd40lgP27548 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.46□□□□□ -0.58
Cd40lgP27548 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd40lgP27548 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd40lgP27548 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.46□□□□□ -0.58
Cd40lgP27548 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd40lgP27548 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cd40lgP27548 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd40lgP27548 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cd40lgP27548 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cd40lgP27548 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.46□□□□□ -0.58
Cd40lgP27548 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.45□□□□□ -0.58
Cd40lgP27548 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.45□□□□□ -0.58
Cd40lgP27548 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.45□□□□□ -0.58
Cd40lgP27548 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.45□□□□□ -0.58
Cd40lgP27548 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm45331-201ENSMUST00000209868 554 ntBASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm9368-201ENSMUST00000219348 831 ntBASIC11.45□□□□□ -0.58
Cd40lgP27548 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.45□□□□□ -0.58
Cd40lgP27548 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cd40lgP27548 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm13813-201ENSMUST00000120998 787 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm24548-201ENSMUST00000158650 108 ntBASIC11.44□□□□□ -0.58
Cd40lgP27548 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.44□□□□□ -0.58
Cd40lgP27548 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms