Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Clk1P22518 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.61□□□□□ -0.55
Clk1P22518 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Clk1P22518 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Clk1P22518 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.61□□□□□ -0.55
Clk1P22518 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.61□□□□□ -0.55
Clk1P22518 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Clk1P22518 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.61□□□□□ -0.55
Clk1P22518 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.61□□□□□ -0.55
Clk1P22518 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.61□□□□□ -0.55
Clk1P22518 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.61□□□□□ -0.55
Clk1P22518 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Clk1P22518 Gm40466-201ENSMUST00000212174 422 ntBASIC11.61□□□□□ -0.55
Clk1P22518 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.61□□□□□ -0.55
Clk1P22518 Gm24526-201ENSMUST00000082921 158 ntBASIC11.61□□□□□ -0.55
Clk1P22518 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.61□□□□□ -0.55
Clk1P22518 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Clk1P22518 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Clk1P22518 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Clk1P22518 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.61□□□□□ -0.55
Clk1P22518 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Clk1P22518 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.6□□□□□ -0.55
Clk1P22518 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.6□□□□□ -0.55
Clk1P22518 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.6□□□□□ -0.55
Clk1P22518 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Clk1P22518 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.6□□□□□ -0.55
Clk1P22518 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.6□□□□□ -0.55
Clk1P22518 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Snord83b-201ENSMUST00000104546 94 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Gm13226-201ENSMUST00000117838 404 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.6□□□□□ -0.55
Clk1P22518 Gm16379-201ENSMUST00000161469 348 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Gm27731-201ENSMUST00000185192 107 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Gm8762-201ENSMUST00000193486 339 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Snora73a-201ENSMUST00000082453 205 ntBASIC11.6□□□□□ -0.55
Clk1P22518 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.6□□□□□ -0.55
Clk1P22518 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.6□□□□□ -0.55
Clk1P22518 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Clk1P22518 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Clk1P22518 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Clk1P22518 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.6□□□□□ -0.55
Clk1P22518 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.59□□□□□ -0.55
Clk1P22518 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Clk1P22518 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Clk1P22518 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Clk1P22518 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms