Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn1P18608 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.28□□□□□ -0.6
Hmgn1P18608 Gm12859-201ENSMUST00000117834 427 ntBASIC11.28□□□□□ -0.6
Hmgn1P18608 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.28□□□□□ -0.6
Hmgn1P18608 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn1P18608 Gm45668-201ENSMUST00000211271 493 ntBASIC11.28□□□□□ -0.6
Hmgn1P18608 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.28□□□□□ -0.6
Hmgn1P18608 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.28□□□□□ -0.6
Hmgn1P18608 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn1P18608 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn1P18608 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hmgn1P18608 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.28□□□□□ -0.6
Hmgn1P18608 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.28□□□□□ -0.6
Hmgn1P18608 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hmgn1P18608 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Hmgn1P18608 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.28□□□□□ -0.6
Hmgn1P18608 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Hmgn1P18608 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn1P18608 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn1P18608 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn1P18608 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn1P18608 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.27□□□□□ -0.6
Hmgn1P18608 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.27□□□□□ -0.6
Hmgn1P18608 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn1P18608 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.27□□□□□ -0.6
Hmgn1P18608 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn1P18608 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hmgn1P18608 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.27□□□□□ -0.61
Hmgn1P18608 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.27□□□□□ -0.61
Hmgn1P18608 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Gm13492-201ENSMUST00000119772 665 ntBASIC11.27□□□□□ -0.61
Hmgn1P18608 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.27□□□□□ -0.61
Hmgn1P18608 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Gm19163-201ENSMUST00000223313 780 ntBASIC11.27□□□□□ -0.61
Hmgn1P18608 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hmgn1P18608 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Hmgn1P18608 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hmgn1P18608 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.26□□□□□ -0.61
Hmgn1P18608 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hmgn1P18608 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hmgn1P18608 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hmgn1P18608 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms