Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.09□□□□□ -0.31
TnfP06804 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TnfP06804 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.09□□□□□ -0.31
TnfP06804 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.09□□□□□ -0.31
TnfP06804 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TnfP06804 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TnfP06804 Gm23949-201ENSMUST00000104027 127 ntBASIC13.09□□□□□ -0.31
TnfP06804 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.09□□□□□ -0.31
TnfP06804 Gm12380-201ENSMUST00000119012 544 ntBASIC13.09□□□□□ -0.31
TnfP06804 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TnfP06804 Gm28071-201ENSMUST00000190355 478 ntBASIC13.09□□□□□ -0.31
TnfP06804 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TnfP06804 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.09□□□□□ -0.31
TnfP06804 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TnfP06804 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TnfP06804 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TnfP06804 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TnfP06804 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TnfP06804 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.08□□□□□ -0.32
TnfP06804 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TnfP06804 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.08□□□□□ -0.32
TnfP06804 Gm23912-201ENSMUST00000104687 87 ntBASIC13.08□□□□□ -0.32
TnfP06804 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
TnfP06804 Gm15711-201ENSMUST00000118889 535 ntBASIC13.08□□□□□ -0.32
TnfP06804 Gm12266-201ENSMUST00000120311 962 ntBASIC13.08□□□□□ -0.32
TnfP06804 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.08□□□□□ -0.32
TnfP06804 B9d1os-201ENSMUST00000137010 674 ntBASIC13.08□□□□□ -0.32
TnfP06804 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.08□□□□□ -0.32
TnfP06804 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Gm5616-201ENSMUST00000165252 384 ntBASIC13.08□□□□□ -0.32
TnfP06804 Gm17040-202ENSMUST00000170597 889 ntBASIC13.08□□□□□ -0.32
TnfP06804 Gm8741-201ENSMUST00000174736 384 ntBASIC13.08□□□□□ -0.32
TnfP06804 Gm25732-201ENSMUST00000175168 60 ntBASIC13.08□□□□□ -0.32
TnfP06804 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TnfP06804 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.08□□□□□ -0.32
TnfP06804 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.08□□□□□ -0.32
TnfP06804 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TnfP06804 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TnfP06804 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TnfP06804 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TnfP06804 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.08□□□□□ -0.32
TnfP06804 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TnfP06804 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
TnfP06804 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
TnfP06804 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TnfP06804 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TnfP06804 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.07□□□□□ -0.32
TnfP06804 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TnfP06804 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Gm22133-201ENSMUST00000102082 109 ntBASIC13.07□□□□□ -0.32
TnfP06804 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TnfP06804 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.07□□□□□ -0.32
TnfP06804 Gm43138-201ENSMUST00000199123 708 ntBASIC13.07□□□□□ -0.32
TnfP06804 Gm43962-201ENSMUST00000203898 190 ntBASIC13.07□□□□□ -0.32
TnfP06804 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TnfP06804 Gm44882-201ENSMUST00000205702 802 ntBASIC13.07□□□□□ -0.32
TnfP06804 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms