Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.03□□□□□ -0.64
P06344 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.03□□□□□ -0.64
P06344 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.03□□□□□ -0.64
P06344 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
P06344 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06344 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06344 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06344 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06344 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06344 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
P06344 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P06344 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
P06344 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P06344 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
P06344 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.02□□□□□ -0.65
P06344 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.02□□□□□ -0.65
P06344 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.02□□□□□ -0.65
P06344 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.02□□□□□ -0.65
P06344 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
P06344 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.02□□□□□ -0.65
P06344 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.02□□□□□ -0.65
P06344 AA914427-201ENSMUST00000193194 1166 ntBASIC11.02□□□□□ -0.65
P06344 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
P06344 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
P06344 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.02□□□□□ -0.65
P06344 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.02□□□□□ -0.65
P06344 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Gm26035-201ENSMUST00000083065 308 ntBASIC11.02□□□□□ -0.65
P06344 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
P06344 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
P06344 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P06344 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
P06344 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.02□□□□□ -0.65
P06344 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P06344 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
P06344 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.01□□□□□ -0.65
P06344 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
P06344 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
P06344 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Gm18056-201ENSMUST00000207670 568 ntBASIC11.01□□□□□ -0.65
P06344 Gm18061-201ENSMUST00000208350 562 ntBASIC11.01□□□□□ -0.65
P06344 Gm18063-201ENSMUST00000208529 568 ntBASIC11.01□□□□□ -0.65
P06344 Gm18052-201ENSMUST00000208750 559 ntBASIC11.01□□□□□ -0.65
P06344 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.01□□□□□ -0.65
P06344 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.01□□□□□ -0.65
P06344 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.01□□□□□ -0.65
P06344 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
P06344 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P06344 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms