Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 AA914427-201ENSMUST00000193194 1166 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm38317-201ENSMUST00000195564 343 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm8712-201ENSMUST00000221090 701 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.39□□□□□ -0.75
Hoxa3P02831 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Hoxa3P02831 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxa3P02831 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.38□□□□□ -0.75
Hoxa3P02831 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.38□□□□□ -0.75
Hoxa3P02831 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.38□□□□□ -0.75
Hoxa3P02831 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm12997-201ENSMUST00000120207 640 ntBASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.38□□□□□ -0.75
Hoxa3P02831 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm18827-201ENSMUST00000188341 790 ntBASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm45186-201ENSMUST00000206874 478 ntBASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm44967-201ENSMUST00000207047 631 ntBASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.38□□□□□ -0.75
Hoxa3P02831 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxa3P02831 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Hoxa3P02831 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hoxa3P02831 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms