Protein–RNA interactions for Protein: P01575

Ifnb1, Interferon beta, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifnb1P01575 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ifnb1P01575 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Gm22018-201ENSMUST00000104357 131 ntBASIC13.02□□□□□ -0.33
Ifnb1P01575 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Gm14999-201ENSMUST00000121039 624 ntBASIC13.02□□□□□ -0.33
Ifnb1P01575 Gm13316-201ENSMUST00000140537 691 ntBASIC13.02□□□□□ -0.33
Ifnb1P01575 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Gm27023-201ENSMUST00000182372 285 ntBASIC13.02□□□□□ -0.33
Ifnb1P01575 Gm37201-201ENSMUST00000191845 523 ntBASIC13.02□□□□□ -0.33
Ifnb1P01575 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Ifnb1P01575 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ifnb1P01575 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm23931-201ENSMUST00000103842 109 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm13875-201ENSMUST00000120162 282 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.01□□□□□ -0.33
Ifnb1P01575 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Snora78-201ENSMUST00000158630 128 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ifnb1P01575 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Map1b-203ENSMUST00000223725 2669 ntBASIC13.01□□□□□ -0.33
Ifnb1P01575 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ifnb1P01575 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Ifnb1P01575 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ifnb1P01575 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13□□□□□ -0.33
Ifnb1P01575 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ifnb1P01575 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ifnb1P01575 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ifnb1P01575 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms