Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Gm6963-201ENSMUST00000147879 379 ntBASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lonrf3Q9D4H7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm23119-201ENSMUST00000158610 140 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm26361-201ENSMUST00000158868 186 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm27341-201ENSMUST00000183570 106 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm2260-201ENSMUST00000184965 657 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm44651-201ENSMUST00000207343 372 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lonrf3Q9D4H7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Gm14130-201ENSMUST00000118417 987 ntBASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Gm24990-201ENSMUST00000157406 323 ntBASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lonrf3Q9D4H7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms