Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Gm8343-201ENSMUST00000182705 994 ntBASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Gm18711-201ENSMUST00000199341 750 ntBASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim34aQ99PP6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Gm4607-201ENSMUST00000206649 577 ntBASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim34aQ99PP6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim34aQ99PP6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim34aQ99PP6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim34aQ99PP6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim34aQ99PP6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.21■□□□□ 0.02
Trim34aQ99PP6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim34aQ99PP6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim34aQ99PP6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim34aQ99PP6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim34aQ99PP6 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms