Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ndc1Q8VCB1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Gm14999-201ENSMUST00000121039 624 ntBASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Gm5363-201ENSMUST00000211927 938 ntBASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ndc1Q8VCB1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Gm14017-201ENSMUST00000121934 386 ntBASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Gm8885-201ENSMUST00000189382 598 ntBASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Gm45186-201ENSMUST00000206874 478 ntBASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ndc1Q8VCB1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ndc1Q8VCB1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms