Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.15■□□□□ 0.02
Tmc1Q8R4P5 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 AC126257.2-201ENSMUST00000215507 2300 ntBASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Gm11637-201ENSMUST00000120601 592 ntBASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Proscos-202ENSMUST00000178990 666 ntBASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Gm27331-201ENSMUST00000183705 60 ntBASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.14■□□□□ 0.01
Tmc1Q8R4P5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm5187-201ENSMUST00000117317 991 ntBASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm13123-201ENSMUST00000122173 492 ntBASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm27514-201ENSMUST00000183692 110 ntBASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm5370-201ENSMUST00000187187 574 ntBASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm19692-201ENSMUST00000203856 2084 ntBASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tmc1Q8R4P5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tmc1Q8R4P5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tmc1Q8R4P5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tmc1Q8R4P5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms