Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm22018-201ENSMUST00000104357 131 ntBASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm13342-201ENSMUST00000121055 207 ntBASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm37424-201ENSMUST00000191727 561 ntBASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm37201-201ENSMUST00000191845 523 ntBASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm43133-201ENSMUST00000197472 463 ntBASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim29Q8R2Q0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Gm12742-201ENSMUST00000117326 410 ntBASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Gm12058-201ENSMUST00000118614 437 ntBASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Gm18304-201ENSMUST00000189162 546 ntBASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Gm45880-201ENSMUST00000213041 853 ntBASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim29Q8R2Q0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim29Q8R2Q0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms