Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim9Q8C7M3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trim9Q8C7M3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Map1b-203ENSMUST00000223725 2669 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gm15370-201ENSMUST00000117158 253 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gm27501-201ENSMUST00000183599 107 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gm37489-201ENSMUST00000191883 159 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Gm6013-201ENSMUST00000212264 699 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim9Q8C7M3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.61□□□□□ -0.23
Trim9Q8C7M3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms