Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Gm21811-201ENSMUST00000096485 930 ntBASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ptcd1Q8C2E4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm12795-201ENSMUST00000117594 539 ntBASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm12501-201ENSMUST00000119163 529 ntBASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm19287-201ENSMUST00000203190 358 ntBASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ptcd1Q8C2E4 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Gm38210-201ENSMUST00000191944 809 ntBASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Gm18038-201ENSMUST00000197900 485 ntBASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Gm45550-201ENSMUST00000209380 946 ntBASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptcd1Q8C2E4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptcd1Q8C2E4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms