Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ShbQ6PD21 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
ShbQ6PD21 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Mir181d-201ENSMUST00000102383 72 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm13351-201ENSMUST00000118087 414 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm11578-201ENSMUST00000118530 459 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.2□□□□□ -0.3
ShbQ6PD21 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm17214-201ENSMUST00000164501 541 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm5700-201ENSMUST00000191483 989 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm38151-201ENSMUST00000195085 289 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm5870-201ENSMUST00000196461 282 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm42816-201ENSMUST00000198433 325 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm5340-201ENSMUST00000203733 880 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Gm6855-201ENSMUST00000206307 790 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ShbQ6PD21 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ShbQ6PD21 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ShbQ6PD21 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.2□□□□□ -0.3
ShbQ6PD21 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ShbQ6PD21 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.19□□□□□ -0.3
ShbQ6PD21 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ShbQ6PD21 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.19□□□□□ -0.3
ShbQ6PD21 Gm14270-201ENSMUST00000118388 846 ntBASIC13.19□□□□□ -0.3
ShbQ6PD21 Gm14213-201ENSMUST00000119778 768 ntBASIC13.19□□□□□ -0.3
ShbQ6PD21 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.19□□□□□ -0.3
ShbQ6PD21 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.19□□□□□ -0.3
ShbQ6PD21 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.19□□□□□ -0.3
ShbQ6PD21 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.19□□□□□ -0.3
ShbQ6PD21 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ShbQ6PD21 Gm26035-201ENSMUST00000083065 308 ntBASIC13.19□□□□□ -0.3
ShbQ6PD21 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.19□□□□□ -0.3
ShbQ6PD21 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ShbQ6PD21 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
ShbQ6PD21 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.18□□□□□ -0.3
ShbQ6PD21 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ShbQ6PD21 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
ShbQ6PD21 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.18□□□□□ -0.3
ShbQ6PD21 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ShbQ6PD21 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ShbQ6PD21 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms