Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Foxc1Q61572 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm15515-201ENSMUST00000117827 822 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm11877-201ENSMUST00000118921 852 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm22331-201ENSMUST00000158066 136 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm6153-201ENSMUST00000172004 1058 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm8810-201ENSMUST00000172895 754 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm9931-201ENSMUST00000193584 1185 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm37922-201ENSMUST00000195596 455 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm5641-202ENSMUST00000198699 1080 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 AU022133-201ENSMUST00000200601 873 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm7561-201ENSMUST00000211203 886 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Ssr1-203ENSMUST00000225246 1825 ntBASIC9.39□□□□□ -0.91
Foxc1Q61572 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Foxc1Q61572 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.39□□□□□ -0.91
Foxc1Q61572 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.38□□□□□ -0.91
Foxc1Q61572 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Foxc1Q61572 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Foxc1Q61572 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms