Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.47□□□□□ -0.41
Six4Q61321 Mir6420-201ENSMUST00000185032 102 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Gm8885-201ENSMUST00000189382 598 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.47□□□□□ -0.41
Six4Q61321 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.47□□□□□ -0.41
Six4Q61321 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.47□□□□□ -0.41
Six4Q61321 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.47□□□□□ -0.41
Six4Q61321 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Six4Q61321 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Gm26232-201ENSMUST00000083360 166 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.47□□□□□ -0.41
Six4Q61321 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.47□□□□□ -0.41
Six4Q61321 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Six4Q61321 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Six4Q61321 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.47□□□□□ -0.41
Six4Q61321 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Six4Q61321 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Six4Q61321 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.46□□□□□ -0.41
Six4Q61321 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.46□□□□□ -0.41
Six4Q61321 Gm11930-201ENSMUST00000117788 190 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Gm14381-201ENSMUST00000122105 414 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Six4Q61321 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Six4Q61321 Gm3096-201ENSMUST00000185770 364 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Gm4034-201ENSMUST00000187674 480 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.46□□□□□ -0.41
Six4Q61321 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.46□□□□□ -0.41
Six4Q61321 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.46□□□□□ -0.41
Six4Q61321 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Gm9996-201ENSMUST00000070359 913 ntBASIC12.46□□□□□ -0.41
Six4Q61321 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Six4Q61321 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.46□□□□□ -0.41
Six4Q61321 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Six4Q61321 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six4Q61321 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Six4Q61321 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Six4Q61321 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six4Q61321 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.46□□□□□ -0.42
Six4Q61321 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six4Q61321 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six4Q61321 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Six4Q61321 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Gm17376-201ENSMUST00000166016 84 ntBASIC12.45□□□□□ -0.42
Six4Q61321 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.45□□□□□ -0.42
Six4Q61321 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Gm10312-201ENSMUST00000078515 489 ntBASIC12.45□□□□□ -0.42
Six4Q61321 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.45□□□□□ -0.42
Six4Q61321 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Six4Q61321 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms