Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Snx27Q3UHD6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Snx27Q3UHD6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.37□□□□□ -0.27
Snx27Q3UHD6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Gm12266-201ENSMUST00000120311 962 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Gm12566-201ENSMUST00000121479 359 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Gm9630-201ENSMUST00000178304 885 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Snx27Q3UHD6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm22133-201ENSMUST00000102082 109 ntBASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm7722-201ENSMUST00000120646 741 ntBASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm28071-201ENSMUST00000190355 478 ntBASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm44882-201ENSMUST00000205702 802 ntBASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Nsd1-205ENSMUST00000224693 852 ntBASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm5455-201ENSMUST00000058710 715 ntBASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Snx27Q3UHD6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Snx27Q3UHD6 Gm18711-201ENSMUST00000199341 750 ntBASIC13.34□□□□□ -0.27
Snx27Q3UHD6 AU022133-201ENSMUST00000200601 873 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms