Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.74□□□□□ -0.53
Nkx3-2P97503 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.74□□□□□ -0.53
Nkx3-2P97503 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.74□□□□□ -0.53
Nkx3-2P97503 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Nkx3-2P97503 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.74□□□□□ -0.53
Nkx3-2P97503 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm23270-201ENSMUST00000104055 131 ntBASIC11.73□□□□□ -0.53
Nkx3-2P97503 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm15703-201ENSMUST00000120250 880 ntBASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm15276-201ENSMUST00000145953 498 ntBASIC11.73□□□□□ -0.53
Nkx3-2P97503 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm25043-201ENSMUST00000158604 212 ntBASIC11.73□□□□□ -0.53
Nkx3-2P97503 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.73□□□□□ -0.53
Nkx3-2P97503 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.73□□□□□ -0.53
Nkx3-2P97503 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.73□□□□□ -0.53
Nkx3-2P97503 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.73□□□□□ -0.53
Nkx3-2P97503 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm27023-201ENSMUST00000182372 285 ntBASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm3096-201ENSMUST00000185770 364 ntBASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.72□□□□□ -0.53
Nkx3-2P97503 Gm37201-201ENSMUST00000191845 523 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms