Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.45□□□□□ -0.26
Trim43cP86449 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trim43cP86449 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.45□□□□□ -0.26
Trim43cP86449 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim43cP86449 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim43cP86449 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.45□□□□□ -0.26
Trim43cP86449 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim43cP86449 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.45□□□□□ -0.26
Trim43cP86449 Gm45865-201ENSMUST00000211815 945 ntBASIC13.45□□□□□ -0.26
Trim43cP86449 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim43cP86449 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.45□□□□□ -0.26
Trim43cP86449 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trim43cP86449 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim43cP86449 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim43cP86449 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim43cP86449 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim43cP86449 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.45□□□□□ -0.26
Trim43cP86449 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.44□□□□□ -0.26
Trim43cP86449 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trim43cP86449 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm24830-201ENSMUST00000102024 166 ntBASIC13.44□□□□□ -0.26
Trim43cP86449 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim43cP86449 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.44□□□□□ -0.26
Trim43cP86449 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim43cP86449 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm27023-201ENSMUST00000182372 285 ntBASIC13.44□□□□□ -0.26
Trim43cP86449 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm6334-201ENSMUST00000207083 228 ntBASIC13.44□□□□□ -0.26
Trim43cP86449 Gm21769-201ENSMUST00000211922 111 ntBASIC13.44□□□□□ -0.26
Trim43cP86449 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.44□□□□□ -0.26
Trim43cP86449 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm26232-201ENSMUST00000083360 166 ntBASIC13.44□□□□□ -0.26
Trim43cP86449 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.44□□□□□ -0.26
Trim43cP86449 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim43cP86449 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.44□□□□□ -0.26
Trim43cP86449 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trim43cP86449 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.43□□□□□ -0.26
Trim43cP86449 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.43□□□□□ -0.26
Trim43cP86449 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trim43cP86449 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms