Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H3f3aP84244 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
H3f3aP84244 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H3f3aP84244 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3aP84244 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H3f3aP84244 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Gm9083-201ENSMUST00000120423 819 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 Gm14726-201ENSMUST00000120623 896 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3aP84244 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.03□□□□□ -0.64
H3f3aP84244 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
H3f3aP84244 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
H3f3aP84244 Gm26956-201ENSMUST00000182176 986 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
H3f3aP84244 Gm30285-201ENSMUST00000214614 422 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.03□□□□□ -0.64
H3f3aP84244 Cts7-204ENSMUST00000225321 1257 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
H3f3aP84244 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3aP84244 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
H3f3aP84244 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.03□□□□□ -0.64
H3f3aP84244 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.03□□□□□ -0.64
H3f3aP84244 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
H3f3aP84244 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H3f3aP84244 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
H3f3aP84244 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
H3f3aP84244 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
H3f3aP84244 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3aP84244 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3aP84244 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.02□□□□□ -0.64
H3f3aP84244 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3aP84244 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3aP84244 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3aP84244 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3aP84244 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3aP84244 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H3f3aP84244 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.02□□□□□ -0.65
H3f3aP84244 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.02□□□□□ -0.65
H3f3aP84244 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.65
H3f3aP84244 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.02□□□□□ -0.65
H3f3aP84244 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.02□□□□□ -0.65
H3f3aP84244 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Gm14832-201ENSMUST00000121289 322 ntBASIC11.02□□□□□ -0.65
H3f3aP84244 Gm24845-201ENSMUST00000158034 109 ntBASIC11.02□□□□□ -0.65
H3f3aP84244 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
H3f3aP84244 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.02□□□□□ -0.65
H3f3aP84244 Gm43179-201ENSMUST00000198797 275 ntBASIC11.02□□□□□ -0.65
H3f3aP84244 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.02□□□□□ -0.65
H3f3aP84244 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.02□□□□□ -0.65
H3f3aP84244 Gm3961-201ENSMUST00000204425 994 ntBASIC11.02□□□□□ -0.65
H3f3aP84244 Gm6334-201ENSMUST00000207083 228 ntBASIC11.02□□□□□ -0.65
H3f3aP84244 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
H3f3aP84244 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.02□□□□□ -0.65
H3f3aP84244 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H3f3aP84244 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H3f3aP84244 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms