Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stra8P70278 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC17.08■□□□□ 0.33
Stra8P70278 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.08■□□□□ 0.32
Stra8P70278 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.08■□□□□ 0.32
Stra8P70278 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Stra8P70278 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.08■□□□□ 0.32
Stra8P70278 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.08■□□□□ 0.32
Stra8P70278 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.08■□□□□ 0.32
Stra8P70278 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.08■□□□□ 0.32
Stra8P70278 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stra8P70278 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Stra8P70278 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Stra8P70278 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC17.07■□□□□ 0.32
Stra8P70278 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC17.07■□□□□ 0.32
Stra8P70278 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Gm16479-201ENSMUST00000121706 932 ntBASIC17.07■□□□□ 0.32
Stra8P70278 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.07■□□□□ 0.32
Stra8P70278 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.07■□□□□ 0.32
Stra8P70278 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Stra8P70278 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stra8P70278 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Stra8P70278 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Stra8P70278 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Stra8P70278 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Stra8P70278 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Stra8P70278 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Mbnl2-204ENSMUST00000227012 2390 ntBASIC17.06■□□□□ 0.32
Stra8P70278 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.06■□□□□ 0.32
Stra8P70278 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Stra8P70278 Gm13394-201ENSMUST00000121658 1000 ntBASIC17.06■□□□□ 0.32
Stra8P70278 Gm14760-201ENSMUST00000121831 999 ntBASIC17.06■□□□□ 0.32
Stra8P70278 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Stra8P70278 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC17.06■□□□□ 0.32
Stra8P70278 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.06■□□□□ 0.32
Stra8P70278 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.06■□□□□ 0.32
Stra8P70278 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.06■□□□□ 0.32
Stra8P70278 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.06■□□□□ 0.32
Stra8P70278 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC17.06■□□□□ 0.32
Stra8P70278 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Stra8P70278 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Stra8P70278 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Stra8P70278 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Stra8P70278 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Retreg1-206ENSMUST00000228306 1430 ntBASIC17.05■□□□□ 0.32
Stra8P70278 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Stra8P70278 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Stra8P70278 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Gm13829-201ENSMUST00000119600 138 ntBASIC17.05■□□□□ 0.32
Stra8P70278 Gm11425-201ENSMUST00000119608 498 ntBASIC17.05■□□□□ 0.32
Stra8P70278 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Gm26185-201ENSMUST00000157692 266 ntBASIC17.05■□□□□ 0.32
Stra8P70278 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Stra8P70278 Gm4271-201ENSMUST00000174444 973 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms