Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rrp1P56183 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rrp1P56183 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rrp1P56183 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.94□□□□□ -0.18
Rrp1P56183 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Rrp1P56183 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm11814-201ENSMUST00000119515 929 ntBASIC13.94□□□□□ -0.18
Rrp1P56183 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.94□□□□□ -0.18
Rrp1P56183 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm8018-201ENSMUST00000173536 789 ntBASIC13.94□□□□□ -0.18
Rrp1P56183 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.94□□□□□ -0.18
Rrp1P56183 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm5035-201ENSMUST00000215581 927 ntBASIC13.94□□□□□ -0.18
Rrp1P56183 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.94□□□□□ -0.18
Rrp1P56183 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.94□□□□□ -0.18
Rrp1P56183 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rrp1P56183 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rrp1P56183 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.93□□□□□ -0.18
Rrp1P56183 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rrp1P56183 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.93□□□□□ -0.18
Rrp1P56183 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.93□□□□□ -0.18
Rrp1P56183 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.93□□□□□ -0.18
Rrp1P56183 Gm18304-201ENSMUST00000189162 546 ntBASIC13.93□□□□□ -0.18
Rrp1P56183 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.93□□□□□ -0.18
Rrp1P56183 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.93□□□□□ -0.18
Rrp1P56183 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.93□□□□□ -0.18
Rrp1P56183 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rrp1P56183 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rrp1P56183 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Rrp1P56183 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rrp1P56183 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.93□□□□□ -0.18
Rrp1P56183 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rrp1P56183 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rrp1P56183 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.92□□□□□ -0.18
Rrp1P56183 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rrp1P56183 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rrp1P56183 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms